Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 Z93015.1-201ENST00000451718 390 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AC010460.2-201ENST00000509054 677 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 SNORA48.9-201ENST00000516419 162 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AL583810.1-201ENST00000553344 1045 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AL731537.2-201ENST00000561565 951 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 RN7SL560P-201ENST00000577943 264 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AC016252.1-201ENST00000609721 474 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AC073592.7-201ENST00000623659 507 ntBASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB13Q9Y5F0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AL354877.1-201ENST00000424412 413 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 BNIP3P40-201ENST00000596017 556 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AL139022.2-201ENST00000606934 443 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC009542.2-202ENST00000619004 1067 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC084824.3-201ENST00000620472 856 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AC152010.1-201ENST00000415779 2006 ntBASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB13Q9Y5F0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms