Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 EIF4HP1-201ENST00000453115 687 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 RCC2P8-201ENST00000502779 1035 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 MIR4538-201ENST00000581377 78 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 MIR3188-201ENST00000583494 85 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC020914.3-201ENST00000594712 304 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC243960.2-201ENST00000600996 747 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC100757.4-201ENST00000626934 759 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AC244452.3-201ENST00000636814 210 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 AP002353.1-201ENST00000528257 1599 ntBASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDGFL3Q9Y3E1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC007952.5-201ENST00000572818 1486 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 RN7SKP214-201ENST00000364208 315 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 TSPY25P-201ENST00000429463 745 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC092580.1-201ENST00000433998 658 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC007274.1-201ENST00000439805 662 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 KRT8P13-201ENST00000463294 1010 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 KRT8P24-201ENST00000560290 1559 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL359881.3-201ENST00000602640 1721 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL451050.2-201ENST00000606967 682 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL157813.1-201ENST00000612996 587 ntBASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
HDGFL3Q9Y3E1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms