Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 MIR326-201ENST00000362220 95 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC112492.5-201ENST00000421897 457 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AP006547.1-201ENST00000563435 692 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC104506.1-201ENST00000609247 429 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 E2F3P2-201ENST00000447755 1422 ntBASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF11Q9Y3C5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 TMBIM7P-202ENST00000641474 1516 ntBASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AC026954.1-201ENST00000429771 1293 ntBASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 HOMER2P2-201ENST00000451621 847 ntBASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 COX20P2-201ENST00000452636 358 ntBASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AC005225.4-201ENST00000557330 545 ntBASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF11Q9Y3C5 AGAP10P-201ENST00000454844 2418 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms