Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.78□□□□□ -0.36
DUX4Q9UBX2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.77□□□□□ -0.36
DUX4Q9UBX2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC104457.1-201ENST00000401024 814 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AL512384.1-201ENST00000406683 331 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC004066.1-201ENST00000502488 802 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 BX539320.1-201ENST00000623759 877 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 MTHFR-210ENST00000641407 2387 ntBASIC12.77□□□□□ -0.37
DUX4Q9UBX2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DUX4Q9UBX2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DUX4Q9UBX2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms