Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PHACTR1Q9C0D0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 ST13P19-201ENST00000442505 1124 ntBASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC106760.1-201ENST00000508690 800 ntBASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 RN7SL713P-201ENST00000582127 302 ntBASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.63□□□□□ -0.07
PHACTR1Q9C0D0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AC005229.1-201ENST00000392885 409 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AP001889.1-201ENST00000525414 633 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 TDH-203ENST00000531764 1110 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AC021016.3-201ENST00000608367 477 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms