Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
UPF3BQ9BZI7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UPF3BQ9BZI7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 HOMER2P2-201ENST00000451621 847 ntBASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AC103810.3-201ENST00000583567 96 ntBASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 MIR6775-201ENST00000617557 69 ntBASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AL023775.1-201ENST00000454907 1746 ntBASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPF3BQ9BZI7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AL157407.1-201ENST00000435784 904 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AC119751.2-201ENST00000504529 210 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 SNX29P1-201ENST00000548357 1007 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 DUX4L46-201ENST00000566845 751 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AC009955.4-201ENST00000597192 544 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 MIR6720-201ENST00000611664 98 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 GPR182-203ENST00000622922 591 ntBASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF3BQ9BZI7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms