Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 SERBP1P3-201ENST00000459980 809 ntBASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 DUX4L47-201ENST00000566374 394 ntBASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SEC22CQ9BRL7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AL035456.1-201ENST00000456064 1369 ntBASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AC131206.1-201ENST00000538078 1211 ntBASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AC103988.2-201ENST00000561804 725 ntBASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AC007967.4-201ENST00000614700 386 ntBASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 FAM90A11P-201ENST00000518378 2218 ntBASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SEC22CQ9BRL7 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SEC22CQ9BRL7 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms