Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AC104982.3-201ENST00000581995 514 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AL132994.2-201ENST00000603120 687 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 AC090164.2-201ENST00000611487 516 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 LINC00115-201ENST00000473798 1317 ntBASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AC105206.1-202ENST00000314927 2368 ntBASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ATP5G2P4-201ENST00000442175 420 ntBASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 AC009779.1-201ENST00000551138 283 ntBASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 LINC02486-201ENST00000604157 3000 ntBASIC13.99□□□□□ -0.17
PDLIM5Q96HC4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM5Q96HC4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms