Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 KLF2P2-201ENST00000416807 1039 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 DFFBP1-201ENST00000433250 979 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SPTLC1P1-201ENST00000447199 261 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MYCLP2-201ENST00000449268 967 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC114812.1-204ENST00000449669 728 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC026434.2-201ENST00000506094 1078 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC124283.3-201ENST00000570869 594 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CHCHD2P3-201ENST00000603038 451 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC099568.2-201ENST00000609194 695 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 PRSS30P-206ENST00000641773 873 ntBASIC12.54□□□□□ -0.4
CCDC107Q8WV48 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AL442647.2-201ENST00000429864 857 ntBASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms