Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 TUBBP5-203ENST00000508529 1334 ntBASIC15.27■□□□□ 0.04
LMO3Q8TAP4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.27■□□□□ 0.04
LMO3Q8TAP4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.27■□□□□ 0.04
LMO3Q8TAP4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LMO3Q8TAP4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 FMO6P-201ENST00000236166 1620 ntBASIC15.26■□□□□ 0.03
LMO3Q8TAP4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 RN7SL530P-201ENST00000485097 298 ntBASIC15.26■□□□□ 0.03
LMO3Q8TAP4 CHCHD2P2-201ENST00000503744 321 ntBASIC15.26■□□□□ 0.03
LMO3Q8TAP4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AC008620.2-201ENST00000510294 1569 ntBASIC15.26■□□□□ 0.03
LMO3Q8TAP4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.26■□□□□ 0.03
LMO3Q8TAP4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LMO3Q8TAP4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms