Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 FKBP4P8-201ENST00000610931 1369 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC007950.2-201ENST00000615045 2347 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 KRT8P43-201ENST00000406052 1458 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC138761.6-201ENST00000583997 1423 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 OR2W2P-201ENST00000406313 909 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AP000244.1-201ENST00000424582 201 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 PSAT1P2-201ENST00000426107 972 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AL929302.1-201ENST00000426556 871 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 STK24P1-201ENST00000455035 1291 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 MIR5001-201ENST00000580185 100 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 RN7SL455P-201ENST00000580629 282 ntBASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD4Q5XG99 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AL357373.1-201ENST00000394974 322 ntBASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AF274858.1-201ENST00000406288 372 ntBASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 RPL3P2-204ENST00000413027 1203 ntBASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms