Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC073869.2-201ENST00000417338 1026 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 MTCYBP11-201ENST00000447254 1109 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 MTND2P39-201ENST00000457230 764 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC130709.1-201ENST00000484779 1212 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AP002803.1-201ENST00000528836 498 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VARS2Q5ST30 MIR6842-201ENST00000612539 65 ntBASIC15.27■□□□□ 0.04
VARS2Q5ST30 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.27■□□□□ 0.04
VARS2Q5ST30 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.27■□□□□ 0.03
VARS2Q5ST30 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.27■□□□□ 0.03
VARS2Q5ST30 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VARS2Q5ST30 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC011498.7-201ENST00000624986 2027 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 RPSAP31-201ENST00000416648 895 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC007041.1-201ENST00000438989 1155 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 KRT18P66-201ENST00000452970 1269 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 TPT1P11-201ENST00000458482 498 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC009084.3-201ENST00000623356 437 ntBASIC15.26■□□□□ 0.03
VARS2Q5ST30 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VARS2Q5ST30 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.26■□□□□ 0.03
VARS2Q5ST30 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 CCT8L1P-201ENST00000465400 1674 ntBASIC15.25■□□□□ 0.03
VARS2Q5ST30 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 MTCYBP32-201ENST00000427945 1084 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms