Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL135901.1-201ENST00000451812 333 ntBASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC138701.2-201ENST00000553634 226 ntBASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 RN7SL718P-201ENST00000581254 303 ntBASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 AC018695.6-201ENST00000614011 534 ntBASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTC1Q2NKJ3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 AL122018.1-201ENST00000446607 2310 ntBASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTC1Q2NKJ3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 KRT17P5-201ENST00000332088 839 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 HERC2P11-201ENST00000562845 725 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AC100756.2-201ENST00000569537 736 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 DGAT2L7P-201ENST00000602462 744 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AC140113.1-201ENST00000603467 169 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AC007250.1-201ENST00000608934 338 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AC092135.3-201ENST00000624151 1846 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 WASH3P-207ENST00000560956 1394 ntBASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTC1Q2NKJ3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CTC1Q2NKJ3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms