Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 MARK2P16-201ENST00000605714 1723 ntBASIC17.19■□□□□ 0.34
RFX7Q2KHR2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 AL627389.1-201ENST00000413508 1182 ntBASIC17.18■□□□□ 0.34
RFX7Q2KHR2 OR8T1P-201ENST00000421347 918 ntBASIC17.18■□□□□ 0.34
RFX7Q2KHR2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 MIR4649-201ENST00000582839 64 ntBASIC17.18■□□□□ 0.34
RFX7Q2KHR2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.18■□□□□ 0.34
RFX7Q2KHR2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
RFX7Q2KHR2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 MIR645-201ENST00000385283 94 ntBASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 AC005041.3-201ENST00000606287 649 ntBASIC17.17■□□□□ 0.34
RFX7Q2KHR2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFX7Q2KHR2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFX7Q2KHR2 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms