Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 BTBD6P1-201ENST00000412176 1267 ntBASIC13.59□□□□□ -0.23
RAE1P78406 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.59□□□□□ -0.23
RAE1P78406 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.59□□□□□ -0.23
RAE1P78406 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.59□□□□□ -0.23
RAE1P78406 AL583810.1-201ENST00000553344 1045 ntBASIC13.59□□□□□ -0.23
RAE1P78406 AC135782.3-201ENST00000562782 2105 ntBASIC13.59□□□□□ -0.23
RAE1P78406 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 AL023803.2-201ENST00000620080 638 ntBASIC13.59□□□□□ -0.23
RAE1P78406 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 MIR600HG-201ENST00000449175 5984 ntBASIC13.59□□□□□ -0.23
RAE1P78406 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 RCC2P1-201ENST00000452257 1476 ntBASIC13.59□□□□□ -0.23
RAE1P78406 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.58□□□□□ -0.23
RAE1P78406 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.58□□□□□ -0.23
RAE1P78406 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
RAE1P78406 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAE1P78406 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 AL591846.1-201ENST00000451736 433 ntBASIC13.58□□□□□ -0.24
RAE1P78406 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RAE1P78406 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.58□□□□□ -0.24
RAE1P78406 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.58□□□□□ -0.24
RAE1P78406 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.58□□□□□ -0.24
RAE1P78406 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.58□□□□□ -0.24
RAE1P78406 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 AC068587.8-201ENST00000641239 219 ntBASIC13.58□□□□□ -0.24
RAE1P78406 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAE1P78406 AC018735.1-201ENST00000437208 1502 ntBASIC13.58□□□□□ -0.24
RAE1P78406 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 AC073869.1-201ENST00000415574 2762 ntBASIC13.58□□□□□ -0.24
RAE1P78406 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAE1P78406 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 PPT1-213ENST00000641319 2388 ntBASIC13.58□□□□□ -0.24
RAE1P78406 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
RAE1P78406 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms