Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL354718.3-201ENST00000616414 581 ntBASIC12.54□□□□□ -0.4
UBA52P62987 AC009542.2-202ENST00000619004 1067 ntBASIC12.54□□□□□ -0.4
UBA52P62987 CR382287.1-201ENST00000623954 586 ntBASIC12.54□□□□□ -0.4
UBA52P62987 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 AC073869.1-201ENST00000415574 2762 ntBASIC12.54□□□□□ -0.4
UBA52P62987 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.54□□□□□ -0.4
UBA52P62987 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UBA52P62987 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UBA52P62987 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBA52P62987 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBA52P62987 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBA52P62987 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 AC026954.1-201ENST00000429771 1293 ntBASIC12.53□□□□□ -0.4
UBA52P62987 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.53□□□□□ -0.4
UBA52P62987 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.53□□□□□ -0.4
UBA52P62987 RPL13AP20-201ENST00000459725 609 ntBASIC12.53□□□□□ -0.4
UBA52P62987 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.53□□□□□ -0.4
UBA52P62987 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.53□□□□□ -0.4
UBA52P62987 RN7SL560P-201ENST00000577943 264 ntBASIC12.53□□□□□ -0.4
UBA52P62987 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.53□□□□□ -0.4
UBA52P62987 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 AC091271.1-201ENST00000611877 1162 ntBASIC12.53□□□□□ -0.4
UBA52P62987 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.53□□□□□ -0.4
UBA52P62987 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 MSTO2P-201ENST00000314835 1709 ntBASIC12.53□□□□□ -0.4
UBA52P62987 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 AC090505.1-201ENST00000430515 1834 ntBASIC12.53□□□□□ -0.4
UBA52P62987 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBA52P62987 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBA52P62987 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBA52P62987 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms