Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.02□□□□□ -0.33
CASP6P55212 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.02□□□□□ -0.33
CASP6P55212 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.02□□□□□ -0.33
CASP6P55212 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.02□□□□□ -0.33
CASP6P55212 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 SIGLEC18P-201ENST00000602271 909 ntBASIC13.02□□□□□ -0.33
CASP6P55212 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 AC126365.1-201ENST00000578585 1514 ntBASIC13.02□□□□□ -0.33
CASP6P55212 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.02□□□□□ -0.33
CASP6P55212 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CASP6P55212 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CASP6P55212 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CASP6P55212 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.01□□□□□ -0.33
CASP6P55212 AC092638.2-201ENST00000441105 947 ntBASIC13.01□□□□□ -0.33
CASP6P55212 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.01□□□□□ -0.33
CASP6P55212 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 AL157792.1-201ENST00000488281 530 ntBASIC13.01□□□□□ -0.33
CASP6P55212 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.01□□□□□ -0.33
CASP6P55212 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CASP6P55212 AC138701.2-201ENST00000553634 226 ntBASIC13.01□□□□□ -0.33
CASP6P55212 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.01□□□□□ -0.33
CASP6P55212 MIR4649-201ENST00000582839 64 ntBASIC13.01□□□□□ -0.33
CASP6P55212 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.01□□□□□ -0.33
CASP6P55212 AC138894.2-201ENST00000602838 371 ntBASIC13.01□□□□□ -0.33
CASP6P55212 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 DMBT1P1-203ENST00000636837 4628 ntBASIC13.01□□□□□ -0.33
CASP6P55212 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 AC092135.3-201ENST00000624151 1846 ntBASIC13.01□□□□□ -0.33
CASP6P55212 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CASP6P55212 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CASP6P55212 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.01□□□□□ -0.33
CASP6P55212 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CASP6P55212 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CASP6P55212 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13□□□□□ -0.33
CASP6P55212 COL6A4P2-202ENST00000504443 2753 ntBASIC13□□□□□ -0.33
CASP6P55212 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CASP6P55212 AC073347.1-201ENST00000421633 2643 ntBASIC13□□□□□ -0.33
CASP6P55212 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CASP6P55212 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CASP6P55212 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms