Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC25A1P53007 HMGA1P1-201ENST00000415560 1062 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 KRT43P-201ENST00000434019 910 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.78□□□□□ -0.36
SLC25A1P53007 HOMER2P2-201ENST00000451621 847 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 RN7SL692P-201ENST00000464677 288 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SLC25A1P53007 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 AC022217.1-201ENST00000521069 738 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 AP000812.2-201ENST00000538934 718 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
SLC25A1P53007 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.78□□□□□ -0.36
SLC25A1P53007 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC25A1P53007 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC25A1P53007 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SLC25A1P53007 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SLC25A1P53007 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.78□□□□□ -0.36
SLC25A1P53007 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 AC061965.1-201ENST00000560524 1465 ntBASIC12.78□□□□□ -0.36
SLC25A1P53007 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.78□□□□□ -0.36
SLC25A1P53007 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SLC25A1P53007 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SLC25A1P53007 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SLC25A1P53007 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.77□□□□□ -0.36
SLC25A1P53007 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SLC25A1P53007 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SLC25A1P53007 ABCD1P2-201ENST00000429313 1601 ntBASIC12.77□□□□□ -0.36
SLC25A1P53007 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SLC25A1P53007 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.77□□□□□ -0.36
SLC25A1P53007 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.77□□□□□ -0.36
SLC25A1P53007 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SLC25A1P53007 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SLC25A1P53007 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC107918.4-201ENST00000641966 3141 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC103592.1-201ENST00000394513 664 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 FAM58BP-201ENST00000439056 645 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC25A1P53007 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC132938.2-201ENST00000579188 680 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC009884.2-201ENST00000603110 324 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 AL591471.1-201ENST00000621855 229 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 AL358472.5-202ENST00000641448 1267 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 AL590824.1-201ENST00000403828 1349 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 SHMT1P1-201ENST00000419974 1312 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 AC114271.1-201ENST00000612689 2813 ntBASIC12.77□□□□□ -0.37
SLC25A1P53007 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SLC25A1P53007 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC25A1P53007 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC25A1P53007 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms