Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.84□□□□□ -0.19
HLCSP50747 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HLCSP50747 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 AL023775.1-201ENST00000454907 1746 ntBASIC13.84□□□□□ -0.19
HLCSP50747 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.84□□□□□ -0.19
HLCSP50747 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.84□□□□□ -0.19
HLCSP50747 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLCSP50747 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLCSP50747 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.83□□□□□ -0.19
HLCSP50747 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.83□□□□□ -0.19
HLCSP50747 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HLCSP50747 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.83□□□□□ -0.19
HLCSP50747 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.83□□□□□ -0.19
HLCSP50747 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLCSP50747 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.83□□□□□ -0.2
HLCSP50747 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HLCSP50747 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.83□□□□□ -0.2
HLCSP50747 AC079178.1-201ENST00000420915 656 ntBASIC13.83□□□□□ -0.2
HLCSP50747 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.83□□□□□ -0.2
HLCSP50747 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 AL591846.1-201ENST00000451736 433 ntBASIC13.83□□□□□ -0.2
HLCSP50747 RPSAP36-202ENST00000494591 1261 ntBASIC13.83□□□□□ -0.2
HLCSP50747 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HLCSP50747 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HLCSP50747 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.83□□□□□ -0.2
HLCSP50747 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 AC244157.2-201ENST00000616239 1006 ntBASIC13.83□□□□□ -0.2
HLCSP50747 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 FKBP4P6-201ENST00000457486 1332 ntBASIC13.83□□□□□ -0.2
HLCSP50747 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.83□□□□□ -0.2
HLCSP50747 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.83□□□□□ -0.2
HLCSP50747 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 AC020907.1-201ENST00000616460 1350 ntBASIC13.83□□□□□ -0.2
HLCSP50747 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLCSP50747 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
HLCSP50747 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 KRT8P4-201ENST00000509735 1454 ntBASIC13.82□□□□□ -0.2
HLCSP50747 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
HLCSP50747 AC111170.3-201ENST00000624282 2464 ntBASIC13.82□□□□□ -0.2
HLCSP50747 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.82□□□□□ -0.2
HLCSP50747 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
HLCSP50747 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
HLCSP50747 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.82□□□□□ -0.2
HLCSP50747 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.82□□□□□ -0.2
HLCSP50747 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLCSP50747 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HLCSP50747 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms