Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-1P43699 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-1P43699 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-1P43699 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC027369.6-201ENST00000525520 931 ntBASIC11.84□□□□□ -0.51
NKX2-1P43699 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.84□□□□□ -0.51
NKX2-1P43699 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC004449.1-201ENST00000564240 433 ntBASIC11.84□□□□□ -0.51
NKX2-1P43699 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NKX2-1P43699 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX2-1P43699 AL928654.5-201ENST00000624831 2501 ntBASIC11.84□□□□□ -0.51
NKX2-1P43699 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.84□□□□□ -0.51
NKX2-1P43699 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX2-1P43699 POM121L14P-201ENST00000406100 1558 ntBASIC11.84□□□□□ -0.51
NKX2-1P43699 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX2-1P43699 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
NKX2-1P43699 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NKX2-1P43699 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.83□□□□□ -0.51
NKX2-1P43699 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
NKX2-1P43699 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-1P43699 MAPK10-262ENST00000641051 5738 ntBASIC11.83□□□□□ -0.52
NKX2-1P43699 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-1P43699 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-1P43699 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
NKX2-1P43699 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-1P43699 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 EIF3FP3-201ENST00000434851 1086 ntBASIC11.83□□□□□ -0.52
NKX2-1P43699 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NKX2-1P43699 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AC067863.1-201ENST00000494933 530 ntBASIC11.83□□□□□ -0.52
NKX2-1P43699 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NKX2-1P43699 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.83□□□□□ -0.52
NKX2-1P43699 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AC015911.4-201ENST00000588022 1070 ntBASIC11.83□□□□□ -0.52
NKX2-1P43699 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AL844908.2-201ENST00000609461 460 ntBASIC11.83□□□□□ -0.52
NKX2-1P43699 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.83□□□□□ -0.52
NKX2-1P43699 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms