Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN3P26045 AC007663.3-201ENST00000609632 465 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN3P26045 AC092299.1-201ENST00000632679 757 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.66□□□□□ -0.06
PTPN3P26045 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 AC018735.1-201ENST00000437208 1502 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 TUBB1P2-201ENST00000422712 1306 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 TUBB1P1-201ENST00000503144 1300 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PTPN3P26045 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN3P26045 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN3P26045 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PTPN3P26045 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN3P26045 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PTPN3P26045 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 AC092580.1-201ENST00000433998 658 ntBASIC14.65□□□□□ -0.06
PTPN3P26045 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PTPN3P26045 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.65□□□□□ -0.06
PTPN3P26045 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN3P26045 AL512310.5-201ENST00000551999 515 ntBASIC14.65□□□□□ -0.06
PTPN3P26045 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN3P26045 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN3P26045 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PTPN3P26045 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.65□□□□□ -0.06
PTPN3P26045 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN3P26045 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN3P26045 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
PTPN3P26045 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
PTPN3P26045 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PTPN3P26045 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 AL928654.5-201ENST00000624831 2501 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.64□□□□□ -0.07
PTPN3P26045 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 KRT18P15-201ENST00000458108 1291 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.64□□□□□ -0.07
PTPN3P26045 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 AC140658.4-201ENST00000561990 352 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.64□□□□□ -0.07
PTPN3P26045 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 AC068587.8-201ENST00000641239 219 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 AC004923.1-202ENST00000642106 209 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms