Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC073413.1-201ENST00000603927 732 ntBASIC13.53□□□□□ -0.24
CHMP24386 AC138696.2-201ENST00000607376 223 ntBASIC13.53□□□□□ -0.24
CHMP24386 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 REXO1L6P-201ENST00000603433 1515 ntBASIC13.53□□□□□ -0.24
CHMP24386 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.53□□□□□ -0.24
CHMP24386 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHMP24386 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.53□□□□□ -0.24
CHMP24386 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.52□□□□□ -0.24
CHMP24386 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.52□□□□□ -0.24
CHMP24386 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.52□□□□□ -0.24
CHMP24386 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.52□□□□□ -0.24
CHMP24386 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CHMP24386 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHMP24386 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CHMP24386 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.52□□□□□ -0.25
CHMP24386 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.52□□□□□ -0.25
CHMP24386 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.52□□□□□ -0.25
CHMP24386 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 AC009542.2-202ENST00000619004 1067 ntBASIC13.52□□□□□ -0.25
CHMP24386 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 AL138725.1-201ENST00000407347 1314 ntBASIC13.52□□□□□ -0.25
CHMP24386 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CHMP24386 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 AC003102.2-201ENST00000589195 1469 ntBASIC13.52□□□□□ -0.25
CHMP24386 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CHMP24386 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.52□□□□□ -0.25
CHMP24386 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CHMP24386 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHMP24386 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.52□□□□□ -0.25
CHMP24386 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CHMP24386 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.51□□□□□ -0.25
CHMP24386 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
CHMP24386 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.51□□□□□ -0.25
CHMP24386 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CHMP24386 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.51□□□□□ -0.25
CHMP24386 AC015688.4-201ENST00000580780 1647 ntBASIC13.51□□□□□ -0.25
CHMP24386 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.51□□□□□ -0.25
CHMP24386 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CHMP24386 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHMP24386 RN7SKP175-201ENST00000408472 289 ntBASIC13.51□□□□□ -0.25
CHMP24386 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.51□□□□□ -0.25
CHMP24386 AC004945.1-201ENST00000416738 983 ntBASIC13.51□□□□□ -0.25
CHMP24386 AC079178.1-201ENST00000420915 656 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms