Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BCKDHAP12694 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
BCKDHAP12694 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.76□□□□□ -0.21
BCKDHAP12694 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 AC131212.3-201ENST00000624087 4219 ntBASIC13.76□□□□□ -0.21
BCKDHAP12694 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
BCKDHAP12694 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.76□□□□□ -0.21
BCKDHAP12694 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 HOMER2P2-201ENST00000451621 847 ntBASIC13.76□□□□□ -0.21
BCKDHAP12694 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.76□□□□□ -0.21
BCKDHAP12694 AC021016.3-201ENST00000608367 477 ntBASIC13.76□□□□□ -0.21
BCKDHAP12694 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
BCKDHAP12694 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.76□□□□□ -0.21
BCKDHAP12694 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.76□□□□□ -0.21
BCKDHAP12694 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BCKDHAP12694 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC244394.1-201ENST00000435000 1665 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BCKDHAP12694 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.75□□□□□ -0.21
BCKDHAP12694 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.75□□□□□ -0.21
BCKDHAP12694 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BCKDHAP12694 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 AL365181.3-201ENST00000605886 3222 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.75□□□□□ -0.21
BCKDHAP12694 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BCKDHAP12694 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 RBM8B-201ENST00000555532 525 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.75□□□□□ -0.21
BCKDHAP12694 AP006547.1-201ENST00000563435 692 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.75□□□□□ -0.21
BCKDHAP12694 KRT18P8-201ENST00000581937 1246 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 AC009955.4-201ENST00000597192 544 ntBASIC13.75□□□□□ -0.21
BCKDHAP12694 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.75□□□□□ -0.21
BCKDHAP12694 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms