Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.24□□□□□ -0.13
COL6A2P12110 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL6A2P12110 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.24□□□□□ -0.13
COL6A2P12110 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL6A2P12110 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COL6A2P12110 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 MIR326-201ENST00000362220 95 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.24□□□□□ -0.13
COL6A2P12110 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 AC112492.5-201ENST00000421897 457 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 BCRP2-202ENST00000447763 634 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 RN7SL752P-201ENST00000463779 287 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 FTH1P14-201ENST00000482930 551 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 BCRP6-201ENST00000510112 632 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 BCRP7-201ENST00000511549 544 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AC078819.1-201ENST00000547454 765 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AC012085.1-201ENST00000548270 765 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.24□□□□□ -0.13
COL6A2P12110 C2orf69P2-201ENST00000562032 1123 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.24□□□□□ -0.13
COL6A2P12110 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.24□□□□□ -0.13
COL6A2P12110 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.24□□□□□ -0.13
COL6A2P12110 LINC02084-201ENST00000606069 1096 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AC138951.2-201ENST00000623455 1161 ntBASIC14.24□□□□□ -0.13
COL6A2P12110 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.24□□□□□ -0.13
COL6A2P12110 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.24□□□□□ -0.13
COL6A2P12110 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
COL6A2P12110 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.24□□□□□ -0.13
COL6A2P12110 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL6A2P12110 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.23□□□□□ -0.13
COL6A2P12110 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL6A2P12110 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.23□□□□□ -0.13
COL6A2P12110 AL157407.1-201ENST00000435784 904 ntBASIC14.23□□□□□ -0.13
COL6A2P12110 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.23□□□□□ -0.13
COL6A2P12110 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL6A2P12110 DUX4L46-201ENST00000566845 751 ntBASIC14.23□□□□□ -0.13
COL6A2P12110 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.23□□□□□ -0.13
COL6A2P12110 AC132192.2-201ENST00000596206 1147 ntBASIC14.23□□□□□ -0.13
COL6A2P12110 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.23□□□□□ -0.13
COL6A2P12110 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL6A2P12110 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.23□□□□□ -0.13
COL6A2P12110 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.23□□□□□ -0.13
COL6A2P12110 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms