Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 AC011474.4-201ENST00000623523 2076 ntBASIC17.16■□□□□ 0.34
CHGBP05060 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CHGBP05060 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 AC006335.1-201ENST00000445200 547 ntBASIC17.16■□□□□ 0.34
CHGBP05060 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 IGLV3-15-201ENST00000518356 244 ntBASIC17.16■□□□□ 0.34
CHGBP05060 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.16■□□□□ 0.34
CHGBP05060 AL512310.5-201ENST00000551999 515 ntBASIC17.16■□□□□ 0.34
CHGBP05060 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.16■□□□□ 0.34
CHGBP05060 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.16■□□□□ 0.34
CHGBP05060 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CHGBP05060 LINC01783-202ENST00000614408 828 ntBASIC17.16■□□□□ 0.34
CHGBP05060 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 BX284668.2-205ENST00000619677 828 ntBASIC17.16■□□□□ 0.34
CHGBP05060 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.16■□□□□ 0.34
CHGBP05060 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 KRT8P19-201ENST00000551916 1455 ntBASIC17.16■□□□□ 0.34
CHGBP05060 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHGBP05060 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHGBP05060 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHGBP05060 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHGBP05060 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHGBP05060 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.15■□□□□ 0.34
CHGBP05060 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.15■□□□□ 0.34
CHGBP05060 POU5F1P2-201ENST00000521750 823 ntBASIC17.15■□□□□ 0.34
CHGBP05060 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.15■□□□□ 0.34
CHGBP05060 BAP1-211ENST00000615113 489 ntBASIC17.15■□□□□ 0.34
CHGBP05060 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHGBP05060 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.15■□□□□ 0.34
CHGBP05060 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.15■□□□□ 0.34
CHGBP05060 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.15■□□□□ 0.34
CHGBP05060 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHGBP05060 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.15■□□□□ 0.34
CHGBP05060 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHGBP05060 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
CHGBP05060 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
CHGBP05060 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHGBP05060 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 KRT8P31-201ENST00000504812 1408 ntBASIC17.14■□□□□ 0.33
CHGBP05060 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms