Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AC041040.1-201ENST00000425197 460 ntBASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AC103563.1-201ENST00000429316 123 ntBASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 BAK1P2-201ENST00000532665 631 ntBASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SHANK2Q9UPX8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 NHP2P1-201ENST00000335274 462 ntBASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 RN7SL288P-201ENST00000490496 291 ntBASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 HNRNPA1P56-201ENST00000505767 954 ntBASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SHANK2Q9UPX8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 URAHP-205ENST00000610227 398 ntBASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 AC011462.4-201ENST00000616866 449 ntBASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 CR392039.1-201ENST00000623217 204 ntBASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHANK2Q9UPX8 AF013593.1-201ENST00000458074 1487 ntBASIC20.7■□□□□ 0.91
SHANK2Q9UPX8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SHANK2Q9UPX8 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 AL356740.1-201ENST00000602192 1297 ntBASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 GUCY2EP-203ENST00000531117 1918 ntBASIC20.7■□□□□ 0.9
SHANK2Q9UPX8 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms