Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AC005740.1-201ENST00000515639 522 ntBASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 MIR4746-201ENST00000579802 71 ntBASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AC026748.1-201ENST00000624349 3251 ntBASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AL109954.1-202ENST00000564051 2148 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 MROH4P-201ENST00000431302 1578 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 SHMT1P1-201ENST00000419974 1312 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 SERPINA7P1-201ENST00000443077 631 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PEBP1P3-201ENST00000455475 548 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AC008494.1-201ENST00000497612 796 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AC090820.1-201ENST00000519722 591 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 BAK1P2-201ENST00000532665 631 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AC006986.1-201ENST00000612764 241 ntBASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PSME2-217ENST00000615264 874 ntTSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PSME2-218ENST00000630027 185 ntTSL 3 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZC3H4Q9UPT8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 FAM226B-201ENST00000602508 1490 ntBASIC17.15■□□□□ 0.34
ZC3H4Q9UPT8 AC090616.6-203ENST00000579186 1945 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms