Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 HINT2P1-201ENST00000419438 481 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 SIGLEC18P-201ENST00000602271 909 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 HSPA8P5-201ENST00000456928 2069 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 KRT18P9-201ENST00000604826 1300 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AC092506.1-202ENST00000401022 528 ntBASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AP000358.1-201ENST00000456260 156 ntBASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 NDUFS6P1-201ENST00000485187 316 ntBASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 KRT8P1-201ENST00000557533 1207 ntBASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.43■□□□□ 0.38
HMG20BQ9P0W2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC097376.2-205ENST00000610159 5334 ntBASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMG20BQ9P0W2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms