Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 DGCR5-201ENST00000399539 862 ntBASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AC236430.1-201ENST00000402231 743 ntBASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AC027796.2-201ENST00000575326 344 ntBASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 GNRHR2-203ENST00000581100 1187 ntBASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
POLR2J2Q9GZM3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AL136309.1-201ENST00000403917 691 ntBASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AC106760.1-201ENST00000508690 800 ntBASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR2J2Q9GZM3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms