Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AL008718.2-201ENST00000609206 1313 ntBASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AC092506.1-202ENST00000401022 528 ntBASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AC100850.1-201ENST00000506768 649 ntBASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 AC015909.5-201ENST00000624336 2266 ntBASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.22■□□□□ 0.35
UPF3BQ9BZI7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AC244394.1-201ENST00000435000 1665 ntBASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 ANKRD19P-201ENST00000338192 862 ntBASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 KLF2P1-201ENST00000447438 1042 ntBASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 CTBP2P5-201ENST00000454986 1264 ntBASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AC104989.1-201ENST00000519711 778 ntBASIC17.21■□□□□ 0.35
UPF3BQ9BZI7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms