Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 AC140912.1-201ENST00000577171 1054 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 MIR5189-201ENST00000577370 114 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 OR10B1P-201ENST00000601666 907 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 AC104506.1-201ENST00000609247 429 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 BAP1-211ENST00000615113 489 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
HDHD3Q9BSH5 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC011495.1-201ENST00000498085 584 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 PTP4A1P2-201ENST00000546033 454 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AJ011932.1-201ENST00000621707 465 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC002472.3-201ENST00000640124 621 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC083964.2-201ENST00000623988 2396 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 AC009093.10-201ENST00000641956 1442 ntBASIC12.2□□□□□ -0.46
HDHD3Q9BSH5 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 PCDHA6-201ENST00000378126 3267 ntBASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HDHD3Q9BSH5 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms