Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.85□□□□□ -0.35
VRK1Q99986 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 GHSR-202ENST00000427970 912 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 HLA-K-203ENST00000430151 1046 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.85□□□□□ -0.35
VRK1Q99986 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 AC104982.3-201ENST00000581995 514 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 PPY2P-201ENST00000582808 702 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.85□□□□□ -0.35
VRK1Q99986 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.85□□□□□ -0.35
VRK1Q99986 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 AC018529.2-202ENST00000611482 3087 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VRK1Q99986 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VRK1Q99986 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
VRK1Q99986 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 POM121L8P-201ENST00000417732 1281 ntBASIC12.84□□□□□ -0.35
VRK1Q99986 POM121L9P-203ENST00000441984 1285 ntBASIC12.84□□□□□ -0.35
VRK1Q99986 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VRK1Q99986 FTLP10-202ENST00000505798 471 ntBASIC12.84□□□□□ -0.35
VRK1Q99986 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.84□□□□□ -0.35
VRK1Q99986 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VRK1Q99986 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.84□□□□□ -0.35
VRK1Q99986 AP001258.2-201ENST00000529891 490 ntBASIC12.84□□□□□ -0.35
VRK1Q99986 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VRK1Q99986 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.84□□□□□ -0.35
VRK1Q99986 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VRK1Q99986 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VRK1Q99986 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.84□□□□□ -0.35
VRK1Q99986 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms