Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 MTHFR-210ENST00000641407 2387 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 AC126335.2-201ENST00000623362 4637 ntBASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RN7SL774P-201ENST00000577467 290 ntBASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 AL021578.1-201ENST00000613646 709 ntBASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM48Q8IWZ4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRIM48Q8IWZ4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 AC245884.6-201ENST00000515672 1067 ntBASIC14.2□□□□□ -0.14
TRIM48Q8IWZ4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms