Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AL157996.1-201ENST00000624684 2299 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 KHSRPP1-201ENST00000427983 1768 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AC005229.1-201ENST00000392885 409 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AC112492.5-201ENST00000421897 457 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 NUS1P3-201ENST00000423502 862 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 KRT43P-201ENST00000434019 910 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AC068587.3-201ENST00000526613 355 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AL022328.1-201ENST00000610050 478 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 AP005019.2-201ENST00000615104 511 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 PCDHB18P-202ENST00000526308 3197 ntBASIC12.9□□□□□ -0.34
LRRC28Q86X40 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRC28Q86X40 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRC28Q86X40 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRRC28Q86X40 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LRRC28Q86X40 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.9□□□□□ -0.35
LRRC28Q86X40 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRRC28Q86X40 AC011498.7-201ENST00000624986 2027 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC004899.2-201ENST00000622993 3860 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 AC134312.5-201ENST00000568031 1313 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 KRT8P14-201ENST00000414254 1442 ntBASIC12.89□□□□□ -0.35
LRRC28Q86X40 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRRC28Q86X40 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRRC28Q86X40 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms