Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC110048.1-201ENST00000604293 2157 ntBASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ACKR1-201ENST00000368121 1240 ntBASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 LRRC59-203ENST00000576448 1531 ntBASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM53Q6P2H8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AL139094.1-201ENST00000405549 1188 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 TMEM198B-204ENST00000484016 896 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PTP4A1P2-201ENST00000546033 454 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AC005252.2-201ENST00000624630 1141 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PRSS30P-206ENST00000641773 873 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms