Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 AL008718.2-201ENST00000609206 1313 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 FAM58BP-201ENST00000439056 645 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 EEF1DP6-201ENST00000449232 372 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 RN7SL818P-201ENST00000485099 259 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 RBM8B-201ENST00000555532 525 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC009884.2-201ENST00000603110 324 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 RN7SL725P-201ENST00000606439 259 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 Z98259.2-201ENST00000641583 609 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 AC006480.2-201ENST00000609770 1337 ntBASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HERC4Q5GLZ8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 AC012441.2-201ENST00000444843 739 ntBASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 IQSEC3P1-201ENST00000538799 536 ntBASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HERC4Q5GLZ8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HERC4Q5GLZ8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms