Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.75■□□□□ 0.27
RHBDL3P58872 GNG10P1-201ENST00000452289 199 ntBASIC16.75■□□□□ 0.27
RHBDL3P58872 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.75■□□□□ 0.27
RHBDL3P58872 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.75■□□□□ 0.27
RHBDL3P58872 AC132825.4-202ENST00000578792 434 ntBASIC16.75■□□□□ 0.27
RHBDL3P58872 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 AL031673.1-201ENST00000611460 466 ntBASIC16.75■□□□□ 0.27
RHBDL3P58872 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.75■□□□□ 0.27
RHBDL3P58872 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 AL139158.3-201ENST00000641212 1562 ntBASIC16.75■□□□□ 0.27
RHBDL3P58872 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RHBDL3P58872 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 ACTG1P19-201ENST00000418987 1116 ntBASIC16.74■□□□□ 0.27
RHBDL3P58872 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 EEF1GP8-201ENST00000506566 1154 ntBASIC16.74■□□□□ 0.27
RHBDL3P58872 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RHBDL3P58872 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 MIR6756-201ENST00000616240 63 ntBASIC16.74■□□□□ 0.27
RHBDL3P58872 AL451007.2-201ENST00000632004 563 ntBASIC16.74■□□□□ 0.27
RHBDL3P58872 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RHBDL3P58872 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDL3P58872 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.74■□□□□ 0.27
RHBDL3P58872 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.73■□□□□ 0.27
RHBDL3P58872 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.73■□□□□ 0.27
RHBDL3P58872 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.73■□□□□ 0.27
RHBDL3P58872 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RHBDL3P58872 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RHBDL3P58872 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 AC015656.1-201ENST00000624209 3578 ntBASIC16.73■□□□□ 0.27
RHBDL3P58872 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RHBDL3P58872 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RHBDL3P58872 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RHBDL3P58872 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RHBDL3P58872 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RHBDL3P58872 AC117503.4-201ENST00000623229 1418 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms