Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CLDN17P56750 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLDN17P56750 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLDN17P56750 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLDN17P56750 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN17P56750 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN17P56750 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN17P56750 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 TUBB8P4-201ENST00000511806 1324 ntBASIC12.88□□□□□ -0.35
CLDN17P56750 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN17P56750 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLDN17P56750 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN17P56750 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.88□□□□□ -0.35
CLDN17P56750 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 MIR1908-201ENST00000410394 80 ntBASIC12.88□□□□□ -0.35
CLDN17P56750 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN17P56750 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN17P56750 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 BNIP3P13-201ENST00000599968 566 ntBASIC12.88□□□□□ -0.35
CLDN17P56750 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN17P56750 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN17P56750 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN17P56750 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CLDN17P56750 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 AL022313.4-201ENST00000562756 2046 ntBASIC12.88□□□□□ -0.35
CLDN17P56750 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN17P56750 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN17P56750 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 LAP3P2-201ENST00000454686 1454 ntBASIC12.87□□□□□ -0.35
CLDN17P56750 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN17P56750 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN17P56750 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN17P56750 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CLDN17P56750 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN17P56750 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 AC106794.1-201ENST00000506935 792 ntBASIC12.87□□□□□ -0.35
CLDN17P56750 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN17P56750 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN17P56750 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN17P56750 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN17P56750 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN17P56750 RN7SL163P-201ENST00000583100 276 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms