Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH4P55283 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CDH4P55283 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDH4P55283 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH4P55283 SBF1P1-201ENST00000444527 5631 ntBASIC14.67□□□□□ -0.06
CDH4P55283 SHMT1P1-201ENST00000419974 1312 ntBASIC14.66□□□□□ -0.06
CDH4P55283 LINC00115-201ENST00000473798 1317 ntBASIC14.66□□□□□ -0.06
CDH4P55283 KRT18P9-201ENST00000604826 1300 ntBASIC14.66□□□□□ -0.06
CDH4P55283 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH4P55283 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH4P55283 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 AC005089.1-201ENST00000619486 2241 ntBASIC14.66□□□□□ -0.06
CDH4P55283 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH4P55283 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH4P55283 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH4P55283 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH4P55283 RN7SL769P-201ENST00000469386 295 ntBASIC14.66□□□□□ -0.06
CDH4P55283 IMP3P2-201ENST00000489760 475 ntBASIC14.66□□□□□ -0.06
CDH4P55283 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH4P55283 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH4P55283 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CDH4P55283 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.66□□□□□ -0.06
CDH4P55283 AC079336.7-201ENST00000623428 1078 ntBASIC14.66□□□□□ -0.06
CDH4P55283 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH4P55283 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH4P55283 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH4P55283 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDH4P55283 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 HMGA1P1-201ENST00000415560 1062 ntBASIC14.65□□□□□ -0.06
CDH4P55283 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 AC114947.1-202ENST00000514136 344 ntBASIC14.65□□□□□ -0.06
CDH4P55283 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH4P55283 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH4P55283 AC006453.1-201ENST00000636037 1257 ntBASIC14.65□□□□□ -0.06
CDH4P55283 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDH4P55283 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDH4P55283 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDH4P55283 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH4P55283 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 KRT8P31-201ENST00000504812 1408 ntBASIC14.65□□□□□ -0.06
CDH4P55283 TBC1D3J-201ENST00000620719 1426 ntBASIC14.65□□□□□ -0.06
CDH4P55283 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH4P55283 AC027601.5-201ENST00000624065 2482 ntBASIC14.65□□□□□ -0.06
CDH4P55283 AL590824.1-201ENST00000403828 1349 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms