Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CENPAP49450 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.19□□□□□ -0.3
CENPAP49450 DGCR5-201ENST00000399539 862 ntBASIC13.19□□□□□ -0.3
CENPAP49450 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.19□□□□□ -0.3
CENPAP49450 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.19□□□□□ -0.3
CENPAP49450 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.19□□□□□ -0.3
CENPAP49450 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 AC022137.2-201ENST00000503482 481 ntBASIC13.19□□□□□ -0.3
CENPAP49450 GCOM2-201ENST00000509133 1104 ntBASIC13.19□□□□□ -0.3
CENPAP49450 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.19□□□□□ -0.3
CENPAP49450 AC138761.1-201ENST00000584393 385 ntBASIC13.19□□□□□ -0.3
CENPAP49450 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.19□□□□□ -0.3
CENPAP49450 BX088702.1-201ENST00000610784 235 ntBASIC13.19□□□□□ -0.3
CENPAP49450 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 AC016397.2-201ENST00000624848 1985 ntBASIC13.19□□□□□ -0.3
CENPAP49450 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 RN7SL832P-201ENST00000607781 1756 ntBASIC13.19□□□□□ -0.3
CENPAP49450 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 AC010336.1-201ENST00000539278 4739 ntBASIC13.19□□□□□ -0.3
CENPAP49450 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 MSTO2P-201ENST00000314835 1709 ntBASIC13.19□□□□□ -0.3
CENPAP49450 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.18□□□□□ -0.3
CENPAP49450 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CENPAP49450 FKBP4P6-201ENST00000457486 1332 ntBASIC13.18□□□□□ -0.3
CENPAP49450 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 AOC4P-203ENST00000566825 2289 ntBASIC13.18□□□□□ -0.3
CENPAP49450 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.18□□□□□ -0.3
CENPAP49450 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.18□□□□□ -0.3
CENPAP49450 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 AC011474.4-201ENST00000623523 2076 ntBASIC13.18□□□□□ -0.3
CENPAP49450 TPM3P8-201ENST00000330554 643 ntBASIC13.18□□□□□ -0.3
CENPAP49450 BAATP1-201ENST00000412284 1225 ntBASIC13.18□□□□□ -0.3
CENPAP49450 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.18□□□□□ -0.3
CENPAP49450 AC245100.3-201ENST00000441281 285 ntBASIC13.18□□□□□ -0.3
CENPAP49450 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.18□□□□□ -0.3
CENPAP49450 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
CENPAP49450 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CENPAP49450 MST1P2-201ENST00000457982 2291 ntBASIC13.18□□□□□ -0.3
CENPAP49450 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.17□□□□□ -0.3
CENPAP49450 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CENPAP49450 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.17□□□□□ -0.3
CENPAP49450 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms