Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 U73169.1-201ENST00000395152 367 ntBASIC15.77■□□□□ 0.12
CTGFP29279 KRT18P33-201ENST00000398525 1043 ntBASIC15.77■□□□□ 0.12
CTGFP29279 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC15.77■□□□□ 0.12
CTGFP29279 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.77■□□□□ 0.12
CTGFP29279 RN7SL523P-201ENST00000484401 298 ntBASIC15.77■□□□□ 0.12
CTGFP29279 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.77■□□□□ 0.12
CTGFP29279 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC15.77■□□□□ 0.12
CTGFP29279 ACTBP9-201ENST00000587663 1099 ntBASIC15.77■□□□□ 0.12
CTGFP29279 AC006986.1-201ENST00000612764 241 ntBASIC15.77■□□□□ 0.12
CTGFP29279 AL512324.3-201ENST00000619383 882 ntBASIC15.77■□□□□ 0.12
CTGFP29279 NF1P11-201ENST00000621292 1282 ntBASIC15.77■□□□□ 0.12
CTGFP29279 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.77■□□□□ 0.12
CTGFP29279 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CTGFP29279 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.77■□□□□ 0.11
CTGFP29279 AC008620.2-201ENST00000510294 1569 ntBASIC15.77■□□□□ 0.11
CTGFP29279 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.77■□□□□ 0.11
CTGFP29279 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTGFP29279 DBET-201ENST00000630918 3363 ntBASIC15.77■□□□□ 0.11
CTGFP29279 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTGFP29279 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.77■□□□□ 0.11
CTGFP29279 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTGFP29279 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTGFP29279 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTGFP29279 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 AC064850.1-201ENST00000413279 1398 ntBASIC15.76■□□□□ 0.11
CTGFP29279 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 AL139158.3-201ENST00000641212 1562 ntBASIC15.76■□□□□ 0.11
CTGFP29279 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CTGFP29279 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 MED15P3-201ENST00000413613 326 ntBASIC15.76■□□□□ 0.11
CTGFP29279 HMGA1P1-201ENST00000415560 1062 ntBASIC15.76■□□□□ 0.11
CTGFP29279 AL359092.2-201ENST00000423330 585 ntBASIC15.76■□□□□ 0.11
CTGFP29279 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.76■□□□□ 0.11
CTGFP29279 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 AP000533.1-201ENST00000456143 1177 ntBASIC15.76■□□□□ 0.11
CTGFP29279 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.76■□□□□ 0.11
CTGFP29279 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 FAM187B2P-201ENST00000577135 713 ntBASIC15.76■□□□□ 0.11
CTGFP29279 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.76■□□□□ 0.11
CTGFP29279 IFNL3P1-201ENST00000595082 501 ntBASIC15.76■□□□□ 0.11
CTGFP29279 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.76■□□□□ 0.11
CTGFP29279 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CTGFP29279 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.76■□□□□ 0.11
CTGFP29279 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTGFP29279 AC132872.4-202ENST00000622924 2756 ntBASIC15.75■□□□□ 0.11
CTGFP29279 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTGFP29279 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.75■□□□□ 0.11
CTGFP29279 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTGFP29279 AC073347.1-201ENST00000421633 2643 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms