Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.23■□□□□ 0.51
RXRBP28702 AC024909.3-201ENST00000611513 2257 ntBASIC18.23■□□□□ 0.51
RXRBP28702 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 MROH4P-201ENST00000431302 1578 ntBASIC18.23■□□□□ 0.51
RXRBP28702 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RXRBP28702 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 AKR1C6P-201ENST00000432950 983 ntBASIC18.23■□□□□ 0.51
RXRBP28702 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RXRBP28702 SNORA47-201ENST00000458862 138 ntBASIC18.23■□□□□ 0.51
RXRBP28702 FPGT-205ENST00000482102 561 ntTSL 4 BASIC18.23■□□□□ 0.51
RXRBP28702 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC18.23■□□□□ 0.51
RXRBP28702 HNRNPA1P7-201ENST00000521273 963 ntBASIC18.23■□□□□ 0.51
RXRBP28702 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.23■□□□□ 0.51
RXRBP28702 AC136475.9-201ENST00000605240 497 ntBASIC18.23■□□□□ 0.51
RXRBP28702 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RXRBP28702 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RXRBP28702 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RXRBP28702 AC015909.5-201ENST00000624336 2266 ntBASIC18.23■□□□□ 0.51
RXRBP28702 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
RXRBP28702 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.22■□□□□ 0.51
RXRBP28702 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 KRT8P25-201ENST00000473150 1456 ntBASIC18.22■□□□□ 0.51
RXRBP28702 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.22■□□□□ 0.51
RXRBP28702 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC18.22■□□□□ 0.51
RXRBP28702 SDCBP2P1-201ENST00000416115 614 ntBASIC18.22■□□□□ 0.51
RXRBP28702 RPL13AP5-201ENST00000439189 612 ntBASIC18.22■□□□□ 0.51
RXRBP28702 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC18.22■□□□□ 0.51
RXRBP28702 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC18.22■□□□□ 0.51
RXRBP28702 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC18.22■□□□□ 0.51
RXRBP28702 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 FP325317.1-201ENST00000539936 1042 ntBASIC18.22■□□□□ 0.51
RXRBP28702 GOLGA2P10-201ENST00000550961 817 ntBASIC18.22■□□□□ 0.51
RXRBP28702 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC18.22■□□□□ 0.51
RXRBP28702 RN7SL827P-201ENST00000607480 288 ntBASIC18.22■□□□□ 0.51
RXRBP28702 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
RXRBP28702 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RXRBP28702 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.22■□□□□ 0.51
RXRBP28702 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 AL356583.3-201ENST00000412354 417 ntBASIC18.21■□□□□ 0.51
RXRBP28702 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 RN7SL22P-201ENST00000471800 269 ntBASIC18.21■□□□□ 0.51
RXRBP28702 LDHAL6CP-201ENST00000502352 1142 ntBASIC18.21■□□□□ 0.51
RXRBP28702 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC18.21■□□□□ 0.51
RXRBP28702 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 AL512310.5-201ENST00000551999 515 ntBASIC18.21■□□□□ 0.51
RXRBP28702 MED11-203ENST00000575284 652 ntTSL 3 BASIC18.21■□□□□ 0.51
RXRBP28702 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC18.21■□□□□ 0.51
RXRBP28702 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 MIR941-1-201ENST00000636396 72 ntBASIC18.21■□□□□ 0.51
RXRBP28702 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.21■□□□□ 0.51
RXRBP28702 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.21■□□□□ 0.51
RXRBP28702 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.21■□□□□ 0.51
RXRBP28702 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RXRBP28702 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.21■□□□□ 0.51
RXRBP28702 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RXRBP28702 AC064801.2-201ENST00000625052 1303 ntBASIC18.21■□□□□ 0.51
RXRBP28702 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
RXRBP28702 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 AC010491.1-201ENST00000563101 2797 ntBASIC18.2■□□□□ 0.5
RXRBP28702 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RXRBP28702 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.2■□□□□ 0.5
RXRBP28702 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RXRBP28702 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms