Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC172P0C7W6 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 BTNL10-201ENST00000595971 695 ntBASIC15.67■□□□□ 0.1
CCDC172P0C7W6 AC104506.1-201ENST00000609247 429 ntBASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ZACNP1-201ENST00000612259 710 ntBASIC15.67■□□□□ 0.1
CCDC172P0C7W6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 AC089987.1-201ENST00000551654 2209 ntBASIC15.67■□□□□ 0.1
CCDC172P0C7W6 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 NUTM2HP-201ENST00000442076 2498 ntBASIC15.67■□□□□ 0.1
CCDC172P0C7W6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC172P0C7W6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AL118506.1-201ENST00000601296 3082 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 USP17L6P-201ENST00000382470 1197 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 CNN2P8-201ENST00000421872 913 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 FAM197Y7-201ENST00000432892 766 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 TTTY23B-201ENST00000442790 549 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 CICP12-201ENST00000455801 843 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 USP32P1-208ENST00000506594 1164 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AC138951.2-201ENST00000623455 1161 ntBASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC172P0C7W6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms