Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AC116345.2-201ENST00000512837 523 ntBASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AL157813.1-201ENST00000612996 587 ntBASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AC139712.1-201ENST00000378256 1875 ntBASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA3F8WFD2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC139749.1-202ENST00000617529 3139 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 MYADML-201ENST00000474610 2147 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TMBIM7P-202ENST00000641474 1516 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 FTLP1-201ENST00000449155 526 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 PRKXP1-201ENST00000561423 1122 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 AC005912.2-201ENST00000619492 2400 ntBASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA3F8WFD2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NPIPA3F8WFD2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
NPIPA3F8WFD2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA3F8WFD2 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms