Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 C1QBPP1-201ENST00000400117 770 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 MIR1202-201ENST00000408529 83 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.66□□□□□ -0.7
NACAE9PAV3 FAM21FP-201ENST00000426241 1131 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 AC007969.1-201ENST00000433675 447 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
NACAE9PAV3 KRT90P-201ENST00000549264 1064 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.66□□□□□ -0.7
NACAE9PAV3 AC009542.2-202ENST00000619004 1067 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 AL603764.1-201ENST00000636452 321 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
NACAE9PAV3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 AC092135.3-201ENST00000624151 1846 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 INE2-201ENST00000630399 1874 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NACAE9PAV3 PCDHA4-204ENST00000618834 10557 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 AL645937.6-201ENST00000641122 3727 ntBASIC10.66□□□□□ -0.7
NACAE9PAV3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NACAE9PAV3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
NACAE9PAV3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 BCRP2-202ENST00000447763 634 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.65□□□□□ -0.7
NACAE9PAV3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 BCRP6-201ENST00000510112 632 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 BCRP7-201ENST00000511549 544 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 AC106820.3-201ENST00000561653 397 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NACAE9PAV3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NACAE9PAV3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 BX539320.1-201ENST00000623759 877 ntBASIC10.65□□□□□ -0.7
NACAE9PAV3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.65□□□□□ -0.7
NACAE9PAV3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms