Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 AC091804.1-201ENST00000486888 567 ntBASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 MIR6869-201ENST00000619434 62 ntBASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 AC010327.5-201ENST00000586923 3061 ntBASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HDGFL3Q9Y3E1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AC107918.4-201ENST00000641966 3141 ntBASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AC044849.1-201ENST00000519737 1188 ntBASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AP001258.2-201ENST00000529891 490 ntBASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 AC092299.1-201ENST00000632679 757 ntBASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HDGFL3Q9Y3E1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HDGFL3Q9Y3E1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AL008707.1-201ENST00000422498 534 ntBASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 NKAIN1P1-201ENST00000435754 582 ntBASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AL512310.5-201ENST00000551999 515 ntBASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AC138649.2-201ENST00000615886 705 ntBASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDGFL3Q9Y3E1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms