Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AC236430.1-201ENST00000402231 743 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AC002472.2-201ENST00000442739 958 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AC140912.1-201ENST00000577171 1054 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RN7SL204P-201ENST00000582831 262 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AC008494.3-201ENST00000606615 944 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RPSAP52-203ENST00000622976 1023 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 CR392039.2-201ENST00000623182 509 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AC024075.2-201ENST00000598112 1473 ntBASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHACTR1Q9C0D0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AL928654.5-201ENST00000624831 2501 ntBASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 RNA5SP486-201ENST00000515961 83 ntBASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 RN7SL602P-201ENST00000578326 324 ntBASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.66□□□□□ -0.06
PHACTR1Q9C0D0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms