Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 GAPDHP21-201ENST00000450301 1010 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AC100827.2-201ENST00000563214 1194 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 DUX4L45-201ENST00000566406 1057 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AC012645.4-201ENST00000610691 1061 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 AP003969.2-201ENST00000623739 2275 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 ABCD1P2-201ENST00000429313 1601 ntBASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GK-202ENST00000378941 458 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AC103592.1-201ENST00000394513 664 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AC012441.2-201ENST00000444843 739 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 HSPB1P2-201ENST00000448722 546 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 RPL18P13-201ENST00000478088 569 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 RPSAP36-202ENST00000494591 1261 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AC092299.1-201ENST00000632679 757 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AC018629.1-201ENST00000623381 1736 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 AL359183.1-201ENST00000623796 2132 ntBASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO3Q9BXY4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RSPO3Q9BXY4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms