Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AL591424.1-201ENST00000442569 1213 ntBASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AC027307.2-201ENST00000591252 911 ntBASIC13.62□□□□□ -0.23
NR1H4Q96RI1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 AL928654.5-201ENST00000624831 2501 ntBASIC13.62□□□□□ -0.23
NR1H4Q96RI1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AC022497.1-201ENST00000624916 3691 ntBASIC13.61□□□□□ -0.23
NR1H4Q96RI1 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 TFAMP1-201ENST00000412727 736 ntBASIC13.61□□□□□ -0.23
NR1H4Q96RI1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AL135744.1-201ENST00000565098 629 ntBASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AC106730.1-201ENST00000566722 1090 ntBASIC13.61□□□□□ -0.23
NR1H4Q96RI1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 AL357140.3-201ENST00000639753 1983 ntBASIC13.61□□□□□ -0.23
NR1H4Q96RI1 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR1H4Q96RI1 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NR1H4Q96RI1 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.6□□□□□ -0.23
NR1H4Q96RI1 FLJ30679-201ENST00000624773 1980 ntBASIC13.6□□□□□ -0.23
NR1H4Q96RI1 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms