Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 IGHV3-71-201ENST00000523324 359 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AL583810.1-201ENST00000553344 1045 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AC068587.8-201ENST00000641239 219 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 MARK2P9-201ENST00000430958 1727 ntBASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.04□□□□□ -0.16
PDLIM5Q96HC4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AL591846.1-201ENST00000451736 433 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 RN7SL163P-201ENST00000583100 276 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AC004923.1-202ENST00000642106 209 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 RCC2P1-201ENST00000452257 1476 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 NCLP1-201ENST00000445357 1963 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDLIM5Q96HC4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
PDLIM5Q96HC4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC078875.1-201ENST00000431907 724 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 BNIP3P42-201ENST00000454982 569 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms